AI infrastructure for microbiome research

Building AI tooling for microbiome research teams

Celeri lab is building AI-powered tools to support microbiome analysis and unlock biomarker discovery. We are starting with the data foundations to enable large-scale meta-analysis and reproducible research.

1400+

studies

Live

Updated weekly

Global

Worldwide studies

Need comparable gut microbiome studies for a meta-analysis?

Normally that means weeks of searching PubMed, ENA, and spreadsheets.

Here, it's one search.

CancerImmunotherapyn > 30

→ 25 studies found· 3,775 samples

StudyConditionNCountry
PRJNA751792NSCLC338FR
PRJNA972625Melanoma164PL
PRJNA720145Colorectal cancer54US

+ 22 more

Where we're headed

Done

Curated data layer

A curated, searchable database of public human gut shotgun metagenomic studies.

Current focus

Unified processing

Standardized processing and cohort-level comparability across studies.

Goal

AI analysis tools

AI tools for biomarker discovery and patient stratification on large-scale datasets.

Design Partner Cohort

Help shape the product roadmap

We're looking for a small set of microbiome research teams to co-design analysis workflows and model development in Celeri lab.